Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESEPLYKLKAEFFKTLAHPARIRILELLVERDRSVGELLSSDVGLESSNLSQQLGVLRRAGVVAARRDGNAMIYSIAAPDIAELLAVARKVLARVLSDRVAVLEDLRAGGSAT
4OMZ Chain:A ((16-103))
------AEIAAGFLSAMANPKRLLILDSLVKEEMAVGALAN-KVGLSQSALSQHLSKLRAQNLVSTRRDAQTIYYSSSSDSVMKILGALSEIYGA-------------------
General information:
TITO was launched using:
RESULT:
Template:
4OMZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68527 for 578 contacts (-118.6/contact) +
2D Compatibility (PS) -9468 + (NN) -5043 + (LL) 1736
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -90752.0 ( -157.01 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_4OMZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OMZ-query.scw
PDB file :
Tito_Scwrl_4OMZ.pdb
: