Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------MRTPVI-LVAGQDHTDEVTGALLRRTG-----TVVVEHRFDGHVV------RRMTA--------TLSR-------GELITTEDALEFA-HGCVSCTIRDDLLVLLRRLHRRDNVGRIVVHLAPWLEPQPICW------AIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQAEFADLLVLTHPEPV---AVAVLRRLAPRAR---ITGGVDRVELALAHLDDNSR----RGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLLLDGVVRTRGRLWLANRPDQ--VMWLESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR |
| 4Q0C Chain:A ((33-545)) | SQELTLVGKAAVPDVEVALDGDDWRWLARKRVLTLGVYAPDIPPFDVTYGERYEGLTADYMAIIAHNLGMQAKVLRYPTREQALSALESGQIDLIGTVNGTDGRQQSLRLSVPYAADHPVIVMPIGARHVPASNLAGQRLAVDINYLPKETLARAYPQATLHYFPSSEQALAAVAYGQADVFIGDALTTSHLVSQSYFNDVRVVAPAHIATGGESFGVRADNTRLLRVVNAVLEAIPPSEHRSLIYRWGLGSSISLDFAHPAYSAREQQWMADHPVVKVAVLN-LFAPFTLFRTDEQFGGISAAVLQLLQLRTGLDFEIIGVDTVEELIAKLRSGEADMAGALFVNSARESFLSFSRPYVRNGMVIVTRQDPDAPVDADHLDGRTVALVRN---SAAIPLLQRRYPQAKVVTADNPSEAMLMVANGQADAVVQTQISASYYVNRY-FAGKLRIASALDLPPAEIALATTRGQTELMSILNKALYS----ISNDELASIISRWRGSDGD--------PRTWYAYRNEIYLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152414 for 2827 contacts (-53.9/contact) +
2D Compatibility (PS) -40413 + (NN) -9710 + (LL) 1164
1D Compatibility (HY) -9200 + (ID) 3950
Total energy: -214523.0 ( -75.88 by residue)
QMean score : 0.180
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