Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------MTKKPRNPADYVIGDDVEVSDVDLKQEEVYVDGERLTDERVEQMASESLRLAREREANLIPGGKSLSGGSAHSPAVQVVVSKATHAKL-------KELARSRKMSVS----------------------KLLRPVLDEFVQRETGRILPRR
2B3W Chain:A ((1-168))
MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRV---SSPMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAIEKLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2B3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11084 for 744 contacts (14.9/contact) +
2D Compatibility (PS) -13214 + (NN) -10836 + (LL) 452
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -14514.0 ( -19.51 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_2B3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B3W-query.scw
PDB file :
Tito_Scwrl_2B3W.pdb
: