Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHEQFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMF---PWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNE--QAATDTFGNYRERHDRLIEAIVLIRQLWSG---------------------ERISFTGHYFRTD-ELKLYDTPAMPPPIFVAASGPQSATLAGRYGDGWIAQARDINDAK-LLAAFAAGAQAAGRDPTTLGKRAELFAVVG--DDKAAARAADLWRFTAGAVDQPNPVEIQRAAESNPIEKVLANWAVGTDPGVHIGAVQAVLDAGAVPFLHFPQDDPITAIDFYRTNVLPELR------------------------ |
1TVL Chain:A ((3-432)) | ----RADFIQFGAMIHGVG-----------------GTTDGWRHPDVDPSASTNIEFYMKKAQTAEKGLFSFIFIADGLFISEKSIPHFLNRFEPITILSALASVTKNIGLVGTFSTSFT--EPFTISRQLMSLDHISGGRAGWNLVTSPQEGAARNHSKSNLPEHTERYEIAQEHLDVVRGLWNSWEHDAFIHNKKTGQFFDQAKLHRLNHKGKYFQVEGPLNIGRSKQGEPVVFQAGSSETGRQFAAKNADAIFTHSNSLEETKAFYADVKSRAADEGRDPSSVRIFPGISPIVADTEEEAEKKYREFAELIPIENAVTEAKARNLTLREVAQEMAFPRTLFIGTPERVASLIETWFNAEAADGFIVGSDIP-GTLDAFVEKVIPILQERGLYRQDYRGGTLRENLGLGIPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160925 for 2761 contacts (-58.3/contact) +
2D Compatibility (PS) -36460 + (NN) -19849 + (LL) -48
1D Compatibility (HY) -10800 + (ID) 2950
Total energy: -231032.0 ( -83.68 by residue)
QMean score : 0.380
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