Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MHESRLASA-RLYLCTDARRERGDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDRADIARAAGADVLHLGQRDLPVNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAAN---
2TPS Chain:A ((2-227))
HGIRMTRISREMMKELLSVYFIMGSNNTKADPVTVVQKALKGGATLYQFREKGGD------ALTGEARIKFAEKAQAACREAGVPFIVNDDVELALNLKADGIHIGQEDANAKEVRAAI-GDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEIQTYKTGR
General information:
TITO was launched using:
RESULT:
Template:
2TPS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126753 for 1834 contacts (-69.1/contact) +
2D Compatibility (PS) -25060 + (NN) -27115 + (LL) 312
1D Compatibility (HY) -8400 + (ID) 3050
Total energy: -190066.0 ( -103.63 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_2TPS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2TPS-query.scw
PDB file :
Tito_Scwrl_2TPS.pdb
: