Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGVSEAERRGHRKLVRFQARRAIGPIRPTSAAWDRDFDPAGKRIAVVGTDAAAAHYISRLSESAASVTVFTQAPRRVVTGVPLWTTRAKRWLRRRTGAEHPAVAWAT-AAIDALTS--SGIRTSDGVEHPVDAIIYGTGFAIADQVG-D-QTL-VGAGG-VTIRQAWDDGMEPYLGVAVHGFPNYFFITGPD--------TAAQARCVVECMKLMERTASRRIEVRRSSQQVFNERAQLKPAQPHRQTGGLEAFDLSSAATEDDQTYDGAATLTLAGARFRVRVRLTGHLDPIDGNYHWQGTVFDSLPETSLTHARAATLTIGGRSAPARITEQTPWGTHSVAGVGPPPYARSGPASATT |
| 4YWO Chain:A ((139-331)) | -KFVIATG--SSPLIPRIPGLDKV--GFWTNREAL-SPDRRIDSLAVIGGRALALEFAQMYSRMKVEVAILQRSPVL-IPDWE---PEASVEARRIMEN--DGVAVVTGVNVKEVRKGAGKIVITDKGEVEADEILLATGRKPNVDLGLENAGVRLNERGGIKVD--------DEL---RTDNPHIYAAGDVLGGKMLEALAGRQGSIATENALTG------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93088 for 1349 contacts (-69.0/contact) +
2D Compatibility (PS) -20199 + (NN) -14134 + (LL) 8984
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -123587.0 ( -91.61 by residue)
QMean score : 0.352
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