Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARQVFDDKLLAVISGNSIGV-LATIKHDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLPPGMR
2ASF Chain:A ((11-135))
-------SDDALAFLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVD--GARWLSLEGRAAVNS-----DIDAVRDAELRYAQR---------YRTPRPNPRRVVIEVQIERVLGSADLLD
General information:
TITO was launched using:
RESULT:
Template:
2ASF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60914 for 915 contacts (-66.6/contact) +
2D Compatibility (PS) -13500 + (NN) -8191 + (LL) 840
1D Compatibility (HY) -1200 + (ID) 1450
Total energy: -84415.0 ( -92.26 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_2ASF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ASF-query.scw
PDB file :
Tito_Scwrl_2ASF.pdb
: