Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVARRRERLDELADQLRQEHCVGVEVLPLDLADTQARAQLADRLRSDAIAG----LCNSAGFGTSGRFWELPFARESEEVV-LNALALMELTHAALPGMVKRGAGAVLNIASIAGFQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWAEIASAERFSIPLAQVSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGRFAPRSLLLPAIRIGNRLRGGPSR
3P19 Chain:B ((19-213))
-----------VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--NLPNTLCAQVDVTDKYTFDTAI-------TRAEKIYGPADAIVNNAGMMLLGQI-DTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTE--------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112176 for 1348 contacts (-83.2/contact) +
2D Compatibility (PS) -18509 + (NN) -8023 + (LL) 5712
1D Compatibility (HY) -10000 + (ID) 3500
Total energy: -146496.0 ( -108.68 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_3P19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P19-query.scw
PDB file :
Tito_Scwrl_3P19.pdb
: