Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTQTAKASRRARIERRTRESDIVIELDLD-----GTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSGVPSTKGAL
1RHY Chain:A ((2-187))
--------SERIASVERTTSETHISCTIDLDHIPGVTEQKINVSTGIGFLDHMFTALAKHGGMSLQLQCKGD------LTAEDCALALGEAFKKALGERKGIKRYGYAYAPLDESLSRAVIDISSRPYFMCHLP---FTREKVG----DLSTEMVSHLLQSFAFAAGVTLHIDSIRGENNHHIAESAFKALALAIRMAISR--------------
General information:
TITO was launched using:
RESULT:
Template:
1RHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137816 for 1503 contacts (-91.7/contact) +
2D Compatibility (PS) -18401 + (NN) -3521 + (LL) 1492
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -177646.0 ( -118.19 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_1RHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RHY-query.scw
PDB file :
Tito_Scwrl_1RHY.pdb
: