Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MTAHRSVLLVVHT-GRDEATETARRVEKVL-GDN-KIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGGDGTFLRAAELARNASIPVL-GVNLGRIGFLAEAEAEAIDAVLEHVVAQDYRVEDRLTLDVVVRQGG-RIVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSAFGCDGVLVSTPTGSTAYAFSAGGP-VLWPDLEAI-LVVPNNAHALFGRPMVTSPEATIAI-EIEADGHDALVFCDGRREMLIPAGSRLEVTRCVTSVKWARLDSAPFTDRLVRKFRLPVTGWRGK |
| 3PFN Chain:A ((6-361)) | TTFGPKACVLQNPQTIMHIQDPASQRLTWNKSPKSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVE---KKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDGTLLYASSLFQG-SVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLKVRVVKQAMQ----YQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMI-HPNVPAIMI-TPICPHSLSFRPIVVPAGVELKIMLSPEARNTAWVSFDGRKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFESLAQCLHH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165687 for 2310 contacts (-71.7/contact) +
2D Compatibility (PS) -32094 + (NN) -15217 + (LL) 1296
1D Compatibility (HY) -14800 + (ID) 3600
Total energy: -230102.0 ( -99.61 by residue)
QMean score : 0.452
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