Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLATIDKFAYEKSMLINVGDEKGTLLDAAVRRADPALALELGTYLGYGALRIAR-AAPEARVYSVELAEANASNARRIWAHAGVDDRVVCVVGTIGDGGRTLDALTEHGFATGTLDFVFLDHDKKAYLPDLQSILDRGWLHPGSIVVADNVRVPGAPKYRAYMRRQQGMSWNTIEHKTHLEYQTLVPDLVLESEYLG
2ZTH Chain:A ((27-206))
VLEAIDTYCTQ------VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQD----LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGTPDFLAYVRGSS--SFECTHYSSYLEYMKVV-----------
General information:
TITO was launched using:
RESULT:
Template:
2ZTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85264 for 1344 contacts (-63.4/contact) +
2D Compatibility (PS) -19029 + (NN) -7262 + (LL) 992
1D Compatibility (HY) -17200 + (ID) 3400
Total energy: -131163.0 ( -97.59 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_2ZTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZTH-query.scw
PDB file :
Tito_Scwrl_2ZTH.pdb
: