Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGRISDRDIAAIREGARIEDVVGDYVQLRRAGADSLKGLCPFHNEKSPSFHVRPNHGHFH-----CFGCGEGGDVYAFIQKIEHVSFVEAVELLADRIGHTISYTGAATSVQR----DRGSRSRLLAANAAAAAFYAQALQSDEAAPARQYLTERSFDAAAARKFGCGFAPSGWDSLTKHLQRKGFE--FEELEAAGLSRQGRHGPMDRFHRRLLWPIRTSAGEVVGFGARRLFDDDAMEAKYVNTPETLLYKKSSVMFGIDLAKRDIAKGH----QAVVVEG---YTDVMAMHLAGVTTAVA--SCGTAFGGEH-LAMLRRLMMDDSFFRGELIYVFDGDEAGRAAALKAFDGEQKLAGQSFVAVAPDGMDPCDLRLKCGDAALRDLVARRTPLFEFAIRAAIAEMDLDSAEGRVAALRRCVPMVGQIKDPTLRDEYARQLAGWVGWADVAQVIGRVRGEAKRTKHPRLGRLGSTTIARAAQRPTAGPPTELAVRPDPRDPTLWPQREALKSALQYPALAGPVFDALTVEGFTHP------EYAAVRAAIDTAGGTSAGLSG----AQWLDMVRQQTTSTVTSALISELGVEAIQVD-DDKLPRYIAGVLARL-----QEVWLGRQIAEVKSKLQRMSPI--------EQGDEYHALFGDLVAMEAYRRSLLEQASGDDLTA |
3J16 Chain:B ((1-608)) | MSDKN-----------SRIAIVSADKCKPKKCR-QECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCG----ICVKKCPFDAIQIINLPTNLEAH--VTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKILAGKQKP-----------------NLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAIKGPVQKVGELLKLRMEKSPEDVKRYIKIL--QLENVLKRDIEKLSGGELQRFAIGMSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYL--------SDFVCIIYGVP-----------------SVYGVVTLPASVREGINIFLDGHIPAENLRFRTEAL-----QFRIADATEDLQNDSASRAFSYPSLKKTQGDFVLNVE-----EGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQK--IAPKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVFEGIPSKNAHARAPESLLTGCNRFLKNLNVTFRRDPNSFRPRINKLDSQMDKEQKSSGNYFFLDNTGI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83100 for 4348 contacts (-19.1/contact) +
2D Compatibility (PS) -59444 + (NN) -8867 + (LL) 5916
1D Compatibility (HY) -12800 + (ID) 4250
Total energy: -162545.0 ( -37.38 by residue)
QMean score : 0.195
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