Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MSIEKLKAALPEYAKDIKLNLSS-------------ITRSSVLDQEQLWGTLLASAAATRNPQV-LADIGAEATDHLSAAARHAALGAAAIMGMNNVFYRGRGF-----LEGRYDDLRPGLRMNIIANPGIPKANFELWSFAVSAINGCSHCLVAHEH--------TLRTVGVDREA------IFEALKA-----AAIVSGVAQALATIEALSPS--- |
4OHC Chain:A ((10-230)) | TGYDRQSISDTTAKILLEVQAVHFNAEKPFIFTSGWASPVYIDCRKLISYPRVRRALMEMAETTITRDIGFEQIDAVAGGETAGIPFAAWIADRMMVPMQYVRKKPKGFGRNAQIEGHLEEGSRVLLVEDLTTDSRSKINFVNALRTAGA--TVNHCFVLFHYNIFKESVSVLKDIDVDLHALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54235 for 1298 contacts (-41.8/contact) +
2D Compatibility (PS) -18877 + (NN) -8123 + (LL) 124
1D Compatibility (HY) -8000 + (ID) 1750
Total energy: -90861.0 ( -70.00 by residue)
QMean score : 0.223
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