Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEGSRRPSGMLMSVDLEPVQLVGPDGTPTAERRYHRDLPEETLRWLYEMMVVTRELDTEFVNLQRQGELALYTPCRGQEAAQVGAAACLRKTDWLFPQYRELGVYLVRGIP--------PGHVGVAWRGTW---HGGLQFTTKCCAPMSVPIGTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPTRYRSQEEVDRWATLD-PIPRYRTYLQDQGLWSQRLEEQVTARAKHVRSELRDAVFDA---PDFDVDEVFTTVYAEITPGLQAQREQLRAELARTD |
| 2BFB Chain:A ((42-386)) | --------------------QIINPSEDP--------HLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDNTDLVFGAYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCK--ERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYR-------------------------DHPISRLRHYLLSQGWWD---EEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140879 for 2449 contacts (-57.5/contact) +
2D Compatibility (PS) -33914 + (NN) -21700 + (LL) 3600
1D Compatibility (HY) -19600 + (ID) 6350
Total energy: -218843.0 ( -89.36 by residue)
QMean score : 0.394
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