Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDIGAPVTVQVAVDPPYPVVIGTGLLDELEDLLA-DRH-KVAVVHQPGLA-ETAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIG-RKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAADEKESELREILNYGHTLGHAIERRER-YRWRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDPD-ALPQLLEIMAGDKKTRAGVLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVCAP |
| 5HVN Chain:A ((13-361)) | ------------TFSPSYNIIVDSVL--DFSHILEYVTNKQVLVVTNTTVAKLYLTKFLAALVD-DLDVRTCILEDGEQYKSQQSLDKILSTLLENHFTRNSTVLVALGGGVIGDITGFAAAIYQRGIDFIQIPTTLLSQVDSSVGGKTAINHQLGKNMIGAFYQPKVVYTSIEFYKTLPQREYIAGMAEVVKYAFIS-KDFYLWLDSNRDKILAKDSVTLIEMVKRSCQIKAQVVAMD---TGARAILNFGHTFGHAIEKCQNYRGLKHGEAVGVGMAQAIDFSHYLGLISQQQAKDFNDFIVSFGISIDFPNDICQKEFLEAMLLD----NKELKFILIENIGSLSLQ-KQSKNELEQFLDIS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5HVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231400 for 2803 contacts (-82.6/contact) +
2D Compatibility (PS) -35854 + (NN) -7388 + (LL) 1860
1D Compatibility (HY) -28400 + (ID) 5350
Total energy: -306532.0 ( -109.36 by residue)
QMean score : 0.536
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