Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTFSHPHFFRSVLRWLQVGYPEGVPGPDRVALLSLLRSTPLTEEQIGEVVRHFTENGSPAVADRVIDRDEIAEFISEVTHHDAGPENIQRVAGILAAAGWPLAGVDVGESESGSDRAPASQG
3F2E Chain:A ((8-90))
---FTAVAEQVSAVLSQY------GITGPNRAIYQGFGLKVARALNRLG---------GGPALVNMI--NGLKAYYISAF---NANPTVLDAVTDIIT------------GSPTGYVS------
General information:
TITO was launched using:
RESULT:
Template:
3F2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28994 for 575 contacts (-50.4/contact) +
2D Compatibility (PS) -8888 + (NN) -1829 + (LL) 2112
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -42149.0 ( -73.30 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3F2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F2E-query.scw
PDB file :
Tito_Scwrl_3F2E.pdb
: