Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLAQTVCDARALGAQVPEHRVL--DVSDYQDVAAFAADIHA---RHPSMDVVLNIAGVSAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSSAAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRDDPRVNRWVERFSGHAVTPEKAADKILAGVTRNR-YLVYTSADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP |
| 2PD6 Chain:D ((11-251)) | ---------------LVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETV---RLL-----NHAAFQADVSEARAARCLLEQVQACFSRPPS--VVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPM------GHLGDPEDVADVVAFLASEDSGYITGTSVEV--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -130838 for 1905 contacts (-68.7/contact) +
2D Compatibility (PS) -23356 + (NN) 1354 + (LL) 4964
1D Compatibility (HY) -9200 + (ID) 3950
Total energy: -161026.0 ( -84.53 by residue)
QMean score : 0.517
|
|
|