Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFA-RVLGDPALPHLFFVEGGALAVENALKAAFDWKS-RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV----AFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA----EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSL-PTTADR-DELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
| 4JEW Chain:B ((56-404)) | ----------------------------------------------------GKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFAERVL---------FMNSGTEANETAFKLARHYACVRHS-------PFKTKIIAFHNAFHGRSLFTVSV-GGQPKYSDGFGPKPADIIHVPF---------------NDLHAVKAVMD----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLT---TQEIA-SAFHVGSH-GSTYGGNPLACAVAGATFDIINTPEVLQGIHTKRQQFVQHLQA-IDEQFDIFS----DIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167567 for 2874 contacts (-58.3/contact) +
2D Compatibility (PS) -36550 + (NN) -17680 + (LL) 7608
1D Compatibility (HY) -21200 + (ID) 6250
Total energy: -241639.0 ( -84.08 by residue)
QMean score : 0.419
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