Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARR-------GGD------------VRFAK----------------------TSRMLSDLAG----------------------GHADRSWGQRI----REYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS |
| 4Q4H Chain:B ((303-550)) | -------------SRQFTRPLNELSNQFNMI-QMALASAERIFEILDLEEEKDDPDA----VELREVRGEIEFKNVWFSYDKK--KPVLKDIT-FH-IKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEA-TSNVDTKTEKSIQAAMWKLMEGKT-SIIIAHRL---------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Q4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -42932 for 1016 contacts (-42.3/contact) +
2D Compatibility (PS) -18925 + (NN) -374 + (LL) 3396
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -67185.0 ( -66.13 by residue)
QMean score : 0.269
|
|
|