Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGGRRRGRSGSGRGRGAI-DREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAT
2N2T Chain:A ((1-84))
MG----------------------------QWQIKIYSENEREFRELIERLEEERPSVQYTETTRNGRRQLTIRSNDKNEVDRILEEVRRKVPNARVRETETGSLEHHHHHH-
General information:
TITO was launched using:
RESULT:
Template:
2N2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7783 for 521 contacts (14.9/contact) +
2D Compatibility (PS) -8857 + (NN) -4708 + (LL) 1312
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -6420.0 ( -12.32 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_2N2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2N2T-query.scw
PDB file :
Tito_Scwrl_2N2T.pdb
: