Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKAADWVDRAEAEAEVQRSVERFKAGTH
4ECP Chain:B ((6-166))
VQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDPLDALVLLPEPLFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFELDAIKHFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSVERFKAGG-
General information:
TITO was launched using:
RESULT:
Template:
4ECP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50278 for 1205 contacts (-41.7/contact) +
2D Compatibility (PS) -17673 + (NN) -9886 + (LL) 44
1D Compatibility (HY) -22400 + (ID) 7200
Total energy: -107393.0 ( -89.12 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_4ECP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ECP-query.scw
PDB file :
Tito_Scwrl_4ECP.pdb
: