Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALVVQKYGGSSVADAERIRRVAERIVATKKQGNDVVVVVSAMGDTTDDLLDLAQQVCPAPPPRELDMLLTAGERISNALVAMAIESLGAHARSFTGSQAGVITTGTHGNAKI--IDVTPGRLQTALEEGRVVLVAGFQGVSQDTKDVTTLGRGGSDTTAVAMAAALGADVCEIYTDVDGIFSADPRIVRNARKLDTVTFEEMLEMAACGAKVLMLRCVEYARRHNIPVHVRSSYS-DRPGTVVVGSIKDVPMEDPILTGVAHDRSEAKVTIV--GLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCS-RDVGPAAVEKLDSLRNEIG-----FSQLLYDDHIGK----VSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TSEIRISVLCRDTELDKAVVALHEAFGLGGDEEATVYAGTGR |
| 3C20 Chain:B ((119-467)) | --------------------------------------------------------------PKSRDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAGIITDNNFGSARVKRLEVKE-RLLPLLKEGIIPVVTGFIGTTEEGY-ITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLSYIEAMELAYFGAKVLHPRTIEPAMEKGIPILVKNTFEPESEGTLIT---NDMEMSDSIVKAISTIKNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSS-----ETNISLVVSEEDVDKA----LKALKREFGDKSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIAQGSSEVNISFVIDEKDLLNCVRKLHEKF---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211224 for 2601 contacts (-81.2/contact) +
2D Compatibility (PS) -35615 + (NN) -12747 + (LL) 5244
1D Compatibility (HY) -30400 + (ID) 6000
Total energy: -290742.0 ( -111.78 by residue)
QMean score : 0.468
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