Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSGIQQNTLMDNDPLAHGYYVADLLVALAVVVLMLRARRTRPELARMLLLGTLIGLVWELPVFGLSAWTNTPIIEWATPLPLPTVVFLLAHSVWDGPLLTMGWLLARALTGEPAGALGLTVQVLWGQLTALAVELSAILAGTWSYVDDLWFNPVM---FWFRGHPVTAAMQLTWLLAPLCFAALVRRLALTAR |
3P5E Chain:C ((65-98)) | ----------------------------------------------------------------------------------------------------------------------------------------KAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4977 for 104 contacts (-47.9/contact) +
2D Compatibility (PS) -3013 + (NN) 281 + (LL) 14912
1D Compatibility (HY) -1600 + (ID) 750
Total energy: 4853.0 ( 46.66 by residue)
QMean score : -0.241
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