Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLGPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLT-DHTFDLYAMLATVTDRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAE-RARVSAELRAA-GFTLPPSQANFVWLPLGSRTQDFVEQAADARIVVRPY---G-TDGVRVTVAAPEENDAFLRFARRWRSDQ |
| 3FFH Chain:A ((30-362)) | -------------------GLTKITKLSSNENPLGTSKKVAAIQANSSVETEIY----ASSLRKEVADFY--QLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPE-KHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQ-AFIGECRTSNANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGIEAGTIFSYLEKNGYITRSGAALGFPTAVRITIGKEEDNSAVIALLEKL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256892 for 2680 contacts (-95.9/contact) +
2D Compatibility (PS) -35760 + (NN) -19627 + (LL) 276
1D Compatibility (HY) -21600 + (ID) 4600
Total energy: -338203.0 ( -126.20 by residue)
QMean score : 0.572
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