Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYDVARVRGLHPSLGDGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVL--GADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVG--ALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRVLDVLGVNDVG--GAVTVGLAHYSTMAEVDQLVRALASLG--- |
| 1ECX Chain:A ((1-376)) | MR-----------------VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFE-KRKRTIITTPIEHKAVLETMKYLSMK-GFKVKYVPVD-SRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGVPIRPL-----IHGGGQERGLRSGTQNVPGIVGAARAMEIAVE---------------ELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYV----STHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ECX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -268300 for 3079 contacts (-87.1/contact) +
2D Compatibility (PS) -39400 + (NN) -25639 + (LL) 2448
1D Compatibility (HY) -19200 + (ID) 3650
Total energy: -353741.0 ( -114.89 by residue)
QMean score : 0.535
|
|
|