Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDLKLLRE----NPDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAASKSVGGAS--PEER------------------------PPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGED-D-YAVLDVVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDGLYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPA--DAEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRYRDAS-GKPQIAATLNGTL-ATTRWLVAILENHQRPDGSVRVPDALVPFVGVE--VLEPVA |
| 3VBB Chain:A ((2-470)) | VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSKTIGEKMKKKE--DESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTV-RKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLS-FDEELYKVI-DEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGS----TRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQT-MDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFMPPGLQELIPF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144584 for 3213 contacts (-45.0/contact) +
2D Compatibility (PS) -44109 + (NN) -20580 + (LL) 300
1D Compatibility (HY) -32400 + (ID) 7450
Total energy: -248823.0 ( -77.44 by residue)
QMean score : 0.429
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