Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKSLVALLLLAASGLAQAQ-----------VDLREGHPDRYT-------------VVR-----GDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYVDGQPRLVLNRGESRGTIKLSPKIRSTPIA----EAIPTIPLDK-------------------------------INSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYARGKFADGQPAYGIFRQGKVYIDPKT--KEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMPGEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVF-RTYKKLSYALVLMASRPLSVTDRVQNP |
| 4JP0 Chain:A ((2-381)) | LDTNKVYEISNHANGLYAATYLSLDDSGVSLMNKNDDDIDDYNLKWFLFPIDDDQYIITSYAANNCKVWNVNNDKINVS-----TYSSTNSIQKWQIKANGSSYVIQSDNGK-VLTAGTGQALGLIRLTDESSNNPNQQWNLTSVQTIQLPQKPIIDTKLKDYPKYSGNIDNGTSPQLMGWTLVPCIMVNDPNIDKNTQIKTTPYYILKKYQYWQRAVGSNVALR----PHEKKSYTYEWG-TEIDQKTTIINTLGFQINIDSGMKFDIPEVGGGTDEIKTQLNEELKIEYSHETK---------IMEKYQEQSEIDNPTDQSMNSIGFLTITSLELYRYNGS------EIRIMQIQTSDNDTYNVTSYPNHQQALLLLTNHSYEEVEEITNI----PKSTLIKLKKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15663 for 2215 contacts (-7.1/contact) +
2D Compatibility (PS) -33468 + (NN) -10462 + (LL) 2044
1D Compatibility (HY) -3200 + (ID) 2650
Total energy: -63399.0 ( -28.62 by residue)
QMean score : 0.261
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