Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRLLSDRARGWRR-ALCGIVLGLLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENR-L-LARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQ-QGNLAYLARQVQTRI-RRDYLWYRLARDGFGPAER-QGVRTLVRDKLVRHRYLHQIG-LYSDFHHESDALRELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRGGLAF-DEAVRRYSLADDR-DRDPPGDLG---LIRPQDGRLDLLRKTALIQ-KADTVSQPMRIDGAFEIVRVR------SREDRQLPLDDRSVRFEVN--QAVAREQLAAQFETRLRNLLA--------GARVEGL----------- |
| 3B7F Chain:A ((16-393)) | ------SAPESGPVMLLVATIKG--AWFLASDPARRTWELR--GPVFLGHTIHHIVQ---------DPRE------PERMLMAARTLGPTV---------------------------FRSDDG----------GGNWTEATRPPA------------FNKAPGRVVDHVFWLTPGHAS---EPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWT------GGEPDGPKMHSI--LVDPRDPKHLYI---GMSSGGVFESTDAGTDW--KPLNRGCAANFLPD----PNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREGVWKRIGDAMPREV-GDIGFPIVVHQRDPRT-----VWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASADEGEHWQCIASHLPHIYAVQSARP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24000 for 2554 contacts (9.4/contact) +
2D Compatibility (PS) -32661 + (NN) 8837 + (LL) 8504
1D Compatibility (HY) -4800 + (ID) 3750
Total energy: 130.0 ( 0.05 by residue)
QMean score : 0.127
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