Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSPNILFIMADQMAAPLLPLHDPRSVLRMPHLSRLAERAVVFDSAYCNSPLCAPSRFTLVSGRLPTRIGAWDNAADFAADTPTYAHYLRNLGYRTALSGKMHFCGPDQLHGYEERLTSDIYPADYGWAVNWDEPEVRPSWYHNMSSVLQAGPCVRTNQLDFDEEVVFKARQYLYDHVRQHAGQPFCLTVSMTHPHDPYSIPASYWNLYRDEDIPLPRQRFAQEEQDPHSQRLLKVIDLWDKPLPEERIR--------AARRAYFGACSYVDAQIGALLATLEKCGLADDTIVVFSGDHGDMLGERGLWYKMHW--------FEMAARVPLLVHAPARFAPRRIGASVSTVDLLPTLVELAGGQVDPRLPLEGRSLLPHLRDGSGHDEVIGEYTAEGTLSPLMMIRRGDYKFIYSEQDPCLLYDLRNDPQERENLAASPAHRGTFEAFLDEARRRWDIPAITRAVLDSQRRRRLVAAALARGRLASWDHQPWVDASQQYMRNHIDLDDLERRARFPQP |
| 2W5Q Chain:A ((1-424)) | ----------SEDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKV---NGKEVT-----PFLNKLSSGKEQF-TYFPNFFHQT---------GQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNT----YQSLPAILDQKQGYKSDVMHGDYKTFWN-RDQVYKHF----GIDKFYDATYYDMSDKNVVNLGL----KDKIFFKDSANYQAKMKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTDLNRTGFWIKIPGK-SGGINNEYAGQVDVMPTILHLAGIDTKNYLMF-GTDLFSKGHNQ------------------VVPFRNGD--FITKD-----YKYVNGKIYSNKNNELITTQPADFEKNKKQVEKDLEM---SDNVLNGDLFRFYKNPDFKKVNPSKYKYETGPK------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97594 for 3604 contacts (-27.1/contact) +
2D Compatibility (PS) -43655 + (NN) -23134 + (LL) 6180
1D Compatibility (HY) -14400 + (ID) 3050
Total energy: -175653.0 ( -48.74 by residue)
QMean score : 0.313
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