Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWG-FI-ETDARLALWVPARLHDPRAGRLAQWLREQLAG |
2QSX Chain:A ((19-215)) | ---------------------------------------------------------------------------------------------ELLVVDVTPSFASLWLVPNINDFHQRHPNIRVKILTGDGAV-----ESDLHVRCLPLS-THYEYSQLLCEETLLLIGNTNLP------------ISHYPFIPQTTRPQLWEQFKQEN-----ITYHSVGFEHFYLACEAVRMEKGLALLPDFMAQFSILRGDIQHIGNLKLHSGYGYYVVIPNFRLTSRKVALFHDWLKDKLT- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120055 for 1352 contacts (-88.8/contact) +
2D Compatibility (PS) -18544 + (NN) -5628 + (LL) 8048
1D Compatibility (HY) -10000 + (ID) 1700
Total energy: -147879.0 ( -109.38 by residue)
QMean score : 0.514
|
|
|