Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQRQEAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAAEIKQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRDGSRIEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMDKVALLRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYTNGEYQHLNRSLRQGR---ELDAGQALIDRGMSAAFEKSGPAEQVVKTFRGT---------------QGRDAFEAVKEGQVGHDAGYLSTSRDPGVARSFAGQGTITTLFGRSG------IDVSEISIEGDEQEILYDKGTDMRVLLSAKDGQGVTRRVLEEATLGERSGHGEGLLDALDLATGTDRSGKPQEQDLRLRMRGLDLA |
| 1QS1 Chain:A ((265-461)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLDFKNDINAEAHSWGMKNYEEWAKD-LTDSQREALDGYARQDYKEINNYLRN--QGGSGNEKLDAQIKNISDALGKK-PIPENITVYRWCGMPEFGYQISDPLPS--LKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPK-GSTGAY--LSAIGGFASEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13890 for 1214 contacts (11.4/contact) +
2D Compatibility (PS) -18320 + (NN) -4793 + (LL) 19824
1D Compatibility (HY) -4800 + (ID) 1850
Total energy: 3951.0 ( 3.25 by residue)
QMean score : 0.287
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