Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKRKMLAASLLLWMFSLTAQADCAVL-GPGEDPCAGPVLGPTVCECP--
1UGL Chain:A ((1-50))
NLMKRCTRGFRKL-GKCTTLEEEKCKTLYPRGQCTCSDSKMNTHSCDCKSC
General information:
TITO was launched using:
RESULT:
Template:
1UGL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11789 for 287 contacts (-41.1/contact) +
2D Compatibility (PS) -4789 + (NN) -1679 + (LL) 176
1D Compatibility (HY) 0 + (ID) 500
Total energy: -18581.0 ( -64.74 by residue)
QMean score : -0.068
(partial model without unconserved sides chains):
PDB file :
Tito_1UGL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UGL-query.scw
PDB file :
Tito_Scwrl_1UGL.pdb
: