Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MNDLTLHYLYDPLCGWCYGASPLLAAACEVTGLDVRLHGGGMMTDANRQPVGAGLRHYVMPHDLRIAQLTGQPFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEALDGLGAAMLARIQRAHYVEGRRIAERPVLLELGAELGLGEGFAEAFDACSGEPLRAHFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGGSGAVGGAAAPLCRIDGCA |
| 1FVK Chain:A ((1-188)) | AQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKK--------------------------KLPEGVKMTKYHVNFMGG--------------DLGKDLTQAWAVAMALGVEDKVTVPLFEGVQKTQT-IRSASDIRDVFINAGIK--GEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTS-NMDVFVQQYADTVKYLSEK------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95048 for 1303 contacts (-72.9/contact) +
2D Compatibility (PS) -18823 + (NN) -6597 + (LL) 2584
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -123284.0 ( -94.62 by residue)
QMean score : 0.355
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