Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSGCSTVSYYGQLASGQFALLRAREPAAAV-IA-DPQRDARLRERLAKAEKARQ--FASERLGLPDNRSYRLYADIGRPYVVWNVFATPELSLQPVTHC-FPIAGCVAYRGYYSEAAAR-AEAARQRALGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFYLRDDTAFNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLASRARLEALYAGPLDDAAKRAGKAAEFQRLRREYAALSQREWGGESPFKAWIDAPFNNAKLLPFGLYDQWVAAFAVLFRQVGGNWPAFYARVRALGQLPLAERQAALQRLAAAAP |
| 2HLZ Chain:A ((17-312)) | GSQILCVGLVVLDVISLVDKYPKEDSEIRCL------------------SQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGRNASEQVKMLQRIDAHNT---------------------------RQPPEQKIRVSVEV--------EKPREELFQLFGYGD-----------------------------VVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQ-------GRSVQEALRFGCQVAGKKCGLQGFDGIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HLZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88797 for 2387 contacts (-37.2/contact) +
2D Compatibility (PS) -30987 + (NN) -10214 + (LL) 5108
1D Compatibility (HY) 3200 + (ID) 1700
Total energy: -123390.0 ( -51.69 by residue)
QMean score : 0.204
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