Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MDIDLLDNLL---FAMVRTGTPLLL---VALGELVCERSGVLNL---------GQEGMMLFGAVI----------GF------MVAFSSGSLWLGVLLAVLAGMLLAALFAGVAL-YLNANQVACGLALTIFGVG----LASFVGAAWVGKPLQGFAPLALPVLGELPLLGRMLFAQ-DALVYLSLAL----FAAVAWMLL-RSRAGLVL------QAVGENPDAASAMG---------LPVLRVRT-LAVLFGGAMAGLAG-AYLSLAYTPMWAENMTAGRGWIALALVVFASW------RVL-------RVLLGAWLFGLASI-----------LHLVAQGVGLSIPANLLAMLPYAATILVLVLLSRDALRTRLYAPVSLGQPWKAGH |
| 4CP6 Chain:A ((13-417)) | TKVGSIIQQNNIKYKVLTVEGNIGTVQVGNGVTPVEFEAGQDGKPFTIPTKITVGDKVFTVTEVASQAFSYYPDETGRIVYYPSSITIPSSIKKIQKKGFHGSKAKTIIFDKGSQLEKIEDRAFDFSELEEIELPASLEYIGTSAFSFSQKLKKLTFSSSSKLELISHEAFAN--LSNLEKLTLP--KSVKTLGSNLFRLTTSLKHVDVEEGNESFASVDGVLFSKDKTQLIYYPSQKNDESYKTPKETKELASYSFNKNSYLKKLELNEGLEKIGTFAFADAIKLEEISLPNSLETIERL-AFYGNLELKELILPDNVKNFGKHVMNGLPKLKSLTIGNNINSLPSFFLSGVLDSLKEIHIKNKSTEFSVKKDTFA-IPETVKFYVTSEHIKDVLKSNLSTSNDIIVEKV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -327662 for 2031 contacts (-161.3/contact) +
2D Compatibility (PS) -29566 + (NN) 23636 + (LL) 568
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -347074.0 ( -170.89 by residue)
QMean score : 0.067
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