Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDTLRHARVIILGSGPAGYSAAVYAARANLKPLLITGMQAGGQLTTTTEVDNWPGDPHGLTGPALMQRMQEHAERFETEIVFDHIHAVDLAGKPFTLRGD-NGTYTCDALIVATGASARYLGLPSEQAFMGKGVSACATCDGFFYRNREVAVIGGGNTAVEEALYLANIASRVTLVHRRETFRAEKILQDKLQARVAEGKIVLKLNAEVDEVLGDTMGVTGVRLKTRDGGSEEIAVDGMFVAIGHTPNTSLFEGQLALKD--GYLVVNGGREGNATATNVPGVFAAGDVADHV--YRQAITSAGAGCMAALDVERYLDSL |
| 3F8P Chain:B ((18-316)) | ---------VIIVGLGPAAYGAALYSARYMLKTLVI-GETPGGQLTEAGIVDDYLGLIE-IQASDMIKVFNKHIEKYEVPVLLDIVEKIE----EFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKK---PNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVD-----EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189837 for 2552 contacts (-74.4/contact) +
2D Compatibility (PS) -30729 + (NN) -4734 + (LL) 828
1D Compatibility (HY) -24800 + (ID) 5450
Total energy: -254722.0 ( -99.81 by residue)
QMean score : 0.516
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