Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCAYRREIHHAHVAIRDWLAGDSRADALDALMARFAEDFSMVTPH-----GVVLDKTALGELFRSKGGTRPGLRIEIDGESLLASGVDGATLAYREIQSDA--AGRSERLSTVVLHRDDEGRLYWRHLQETFCG
3FGY Chain:A ((6-114))
----------ENVQIVKDFFAAMGR-GDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEMVEISYPEPPEFV---AQGERVLVVGFATGRVKSTNRTFEDDWVFAITVR-KSKVTSIREYIDTLA
General information:
TITO was launched using:
RESULT:
Template:
3FGY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14881 for 625 contacts (-23.8/contact) +
2D Compatibility (PS) -10219 + (NN) 942 + (LL) 1668
1D Compatibility (HY) -400 + (ID) 750
Total energy: -23640.0 ( -37.82 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_3FGY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FGY-query.scw
PDB file :
Tito_Scwrl_3FGY.pdb
: