Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------MEIACLDLEGVLVPEIWIAFAEKTGIDALKATT-RDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD---SDRVVGYQLRQKDPKRQSVIAFKSLY----YRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL-------------------- |
| 3N28 Chain:A ((3-325)) | LDALTTLPIKKHTALLNRFPETRFVTQLAKKRASWIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDYARIQDVPDLTKPGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKLK--DAPEQILSQVRETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLG-EVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAYHAKPKVEAK-----------------AQTAVRFAGLGGVVCILSAALVAQQKLSWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95277 for 1438 contacts (-66.3/contact) +
2D Compatibility (PS) -19790 + (NN) -4018 + (LL) 1472
1D Compatibility (HY) -5200 + (ID) 2000
Total energy: -124813.0 ( -86.80 by residue)
QMean score : 0.377
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