Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGIPEITAYPLPTAQQLPANLARWSLEPRRAVLLVHDMQRYFLRPLPE---SLRAGLVANAARLRRWCVEQ---GVQIAYTAQPGSMTEEQRGLLKDFWGPGMRASPADREVVEELAPGPDDWLLTKWRYSAFFHSDLLQRMRAAGRDQLVLCGVYAHVGVLISTVDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEVLE
3HB7 Chain:A ((4-184))
---------------------------GMAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKNDAD----FRVRPLHAVKGTWGSDFIPELYPQEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTASKTEEMHEYGLNDLS-IFTKVMTVDQYIQ
General information:
TITO was launched using:
RESULT:
Template:
3HB7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128337 for 1405 contacts (-91.3/contact) +
2D Compatibility (PS) -19103 + (NN) -12916 + (LL) 2076
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -167680.0 ( -119.35 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_3HB7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HB7-query.scw
PDB file :
Tito_Scwrl_3HB7.pdb
: