Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYDSLLDLIGGTPVIRLSKLSARLGVSVFAKLESFNPGGSHKARIALWMILDAERKGILVRGKGQTILEPSGGNTGIGLAMAGNILGYRVSLVVPDNYSPDKRQLLELYGAHVVLSDSRKGNNSHGELAIQILLEHPEFVMLNQQRNPANPQAHREATALEILRDFAGQPPPDFFFAGIGTGGHITGVGEVLRNHWPDMAIYGVQPEQCDLLDDRHAS-HEIQGLSIGIVPEVCNLGIVTGMVGVSKSACLSMIREVLQNDSVSMGLSSAANLVAVLNMASAMPSGARVLTMIYDGVESYMDAFR |
3X43 Chain:F ((3-301)) | -LFNSILDTIGRTPIVRLQRMAPE-HTSVYVKVESFNPGGSVKDRLALSVVLDAEAKGLL--KPGDTIVECTSGNVGIALAMVAAARGYRFVAVMGDTYSVERRKLIRAYGGKLVLFPGHLGSKG-GNLIADELAEKYGWFRARQFDNPANPSYHRETTASEILADFAGK-RLDHFVTGFGTTGTLTGVGQMLRVARPEVRVVALEPSNAAMLARGEWSPHQIQGLAPNFVPGVLDRSVIDDLVTMDEVTARDTSRRLAAEEGIFAGISAGATVATALSIAEHAPEGTVLLAMLPDTGERYLSTFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3X43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188558 for 2752 contacts (-68.5/contact) +
2D Compatibility (PS) -33613 + (NN) -22740 + (LL) 580
1D Compatibility (HY) -20400 + (ID) 5850
Total energy: -270581.0 ( -98.32 by residue)
QMean score : 0.536
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