Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRANSAP-QWAAYPVYPAFRAKNNKVNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVAPPEGGYSIERGAKVYAAQCAICHGADGQGQMALGQTVFPPLWGAQSFNWGAGMHRINT-AASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 3MK7 Chain:C ((128-303)) | -----------------------------------------DPQAVKMGARLFAN-------------YCSICHGSDAKGSLGFPNLADQDW---RWG---GDAASIKTSILNGRIAAMPAWGQAIGEEGVKNVAAFVRKDLAGLPLP-------------EGTDADLSAGKNVYAQTCAVCHGQGGEGMAA---LGAPKLNSAAGWIYGSSLGQLQQTIRHGRNGQMPAQQ-QYLGDDKVHLLAAYVYSLSQ---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63677 for 1301 contacts (-48.9/contact) +
2D Compatibility (PS) -18679 + (NN) -12048 + (LL) 4636
1D Compatibility (HY) -800 + (ID) 1750
Total energy: -92318.0 ( -70.96 by residue)
QMean score : 0.300
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