Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIENRVFLVTGGSSGLGAATAKMLVEQGGKVVLADINAEAGAAKAAELGAQARFVRADIASEADGRQAVAAALEAFGGLHGLANCAGVAPAEKVLGRNGIHALESFRRVIDINLVGSFNMLRLAAEAMSQGQPDEGGERGVIVNTASVAAFDGQIGQAAYSASKSGVVGMTLPIARELARFGIRVMTIAPGIFETPMMAGMPQEVRDSLGASVPFPPRLGRPDEYAALVRQIIENSMLNGEVIRLDGAIRMAAR
1UAY Chain:B ((2-242))
----ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE---------GEDLIYVEGDVTREEDVRRAVARAQEE-APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP----LPEKAKASLAAQVPFPPRLGRPEEYAALVLHILENPMLNGEVVRLDGALRMAPR
General information:
TITO was launched using:
RESULT:
Template:
1UAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126098 for 2040 contacts (-61.8/contact) +
2D Compatibility (PS) -26144 + (NN) -11670 + (LL) 2028
1D Compatibility (HY) -22400 + (ID) 7300
Total energy: -191584.0 ( -93.91 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1UAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UAY-query.scw
PDB file :
Tito_Scwrl_1UAY.pdb
: