Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAAAAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGIPEYLAQVEPALLDTLALGQVLE-MSLPGRERPLQARLASTHNSAGLPVWRGGLVDGDEAESLTVVRGSLETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQG
1HIV Chain:A ((2-44))--------------------------------------------------------------------------QVTLWQRPLVTIKIG-------GQLKEALLDTGADDTVLEEMSLPGRWKP------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1HIV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) 1316 for 155 contacts (8.5/contact) +
2D Compatibility (PS) -3919 + (NN) 3468 + (LL) 9268
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: 5383.0 ( 34.73 by residue)
QMean score : -0.029

(partial model without unconserved sides chains):
PDB file : Tito_1HIV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HIV-query.scw
PDB file : Tito_Scwrl_1HIV.pdb: