Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGGSDGRVVFSKLEGGIWSAPTIV---------AQAGGQDFRDVAGGTMPSGRIVAASTVYE----TGEVKVYVSDDSGVTWVHKFTLARGGADYN------FAHGKSFQVGARYVIPLY--AATGVNYELKWLESSDGGETWGEGSTIYSGNTPYNETSYLPVG---DGVILAVARVGSGAGGALRQ-------FISLDDGGTWTDQGNVTAQNGDSTDILVAPSLSYIYSEGGTPHVVLLYTNRTTHFCYYRTILLAKAVAGSSGWTERVPVYSAPAASGYTSQVVLGGRRILGNLFRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 2W5N Chain:A ((1-367)) | AMKPAGKTFSNVEIFDPPTNYRDPQVLYARPLELSDGTLLGTWENYSPEPPNVWFPIVKSKDGGKTWKEISKVKDTQNNWGLRYQPQLYELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFVSHVALGGEALPNPGLTPVWEPFLMTYKEKLILYYSDQRDNATHSQKLVHQTTTDLKKWSKVVDDTKYADYYARPGMPTVAKLPNNEYIYVYEYGGGPNPPAGSDYWFPVYYRLSKDPQKFLNKAHHQIVSNDGTTPAGSPYVVWTPYGGKNGTIVVSCGTRSE-------IFTNQALGDASAWKKWDV--PQPTAYTRSLLTF------------------------------------------------------QKDPDLLMIMGAGILPPA---------------GGKNTVSASVVRLSEVMKS------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93594 for 2771 contacts (-33.8/contact) +
2D Compatibility (PS) -36802 + (NN) -23475 + (LL) 5192
1D Compatibility (HY) -4800 + (ID) 2450
Total energy: -155929.0 ( -56.27 by residue)
QMean score : 0.348
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