Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGSLMLDIGGTWLTAEDRQILRHPEVGGLIIFARNIEHPAQVRELCAAIRAI-RPDLLLAVDQEGGRVQRLRQGFVR-LPAMRAIADN-PNAEELAEHCGWLMATEVQAVGLDLSFAPVLDLDHQRSAVVGSRAFEGDPERAALLAGAFIRGMHAAGMAATGKHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPFARL-AGQ-LDALMPAHVIYPQVDPQPAGFSRRWLQEILRGELKFDGVIFSDDLSMAGAHVVGDAASRIEAALAAGCDMGLVCNDRASAELALAALQRLKVTPPSRLQRMRGK-GYANTDYRQQPRWLEALSALRAAQLID |
| 2OXN Chain:A ((2-322)) | --GPLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGVDQEGGRVQRFREGFSRIPPAQYYARAENGV--ELAEQGGWLMAAELIAHDVDLSFAPVLDMGFACK-AIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDERET---IAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVL---DNLPIMEVPQAEALLKKQQFSYSELKRLERWQQASANMQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OXN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169723 for 2811 contacts (-60.4/contact) +
2D Compatibility (PS) -33669 + (NN) -12915 + (LL) 2308
1D Compatibility (HY) -22000 + (ID) 7400
Total energy: -243399.0 ( -86.59 by residue)
QMean score : 0.475
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