Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNDMEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKHRAA
2LTE Chain:A ((30-98))
-------HLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKH---
General information:
TITO was launched using:
RESULT:
Template:
2LTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37616 for 456 contacts (-82.5/contact) +
2D Compatibility (PS) -7263 + (NN) -4240 + (LL) 536
1D Compatibility (HY) -10800 + (ID) 3450
Total energy: -62833.0 ( -137.79 by residue)
QMean score : 0.754
(partial model without unconserved sides chains):
PDB file :
Tito_2LTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LTE-query.scw
PDB file :
Tito_Scwrl_2LTE.pdb
: