Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRSPLFSQFPLHERLLKALESLSFSEPTPVQAAAIPKAL--EGHDLRVTAQTGSGKTAAFLLPLLHRLL-AEDKPRSLARALILLPTRELAQQTLKEVERFAQFTF---IKACL-ITGGEDFKVQGARLRK-NPEIIIGTPGRLLEQ-RNAGNLPLQDIEVLVLDEADRMLDMGFADD------VLALANACPAER-QTLLFSATHSGAGLNKVIAEVLREPQVLRLNQVG----ELNENVRQQVITADDVAHK-----EQLLQWLLSNETYTKAIVFTNTRVSADRLTGRLIANQHK----VFVLHGEKDQKDRKLAIERLKQGAVKILVATDVAARGLDVEGLDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHGDWNLMSSVERYLKQNFERRNIKELKAAYQGPKKLKASGKAAGSKKKKQDRKGAAAKPAAKRKPAARPKAGPSAVVSADGMAPLKRKKPTAE |
3I5Y Chain:A ((79-458)) | -----------LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDK-VQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPT-VKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELE---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140442 for 2867 contacts (-49.0/contact) +
2D Compatibility (PS) -38936 + (NN) -28527 + (LL) 4788
1D Compatibility (HY) -30400 + (ID) 6100
Total energy: -239617.0 ( -83.58 by residue)
QMean score : 0.482
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