Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLLFEPLSLRQITLPNRIAVSPMCQYSAQEG-LANDWHLVHLGSRAVGGAGLVIVEATAVLP-----EGRITADDLGIWSDAHVEPLHRITRFIESQGAVAGVQLAHAGRKASTWRPWLGK-HGSVPIGDGGWIPVAPSAIPFDPQHTTPEALSEAQIEALV-QAFVRAAERSLAAGFKVAEVHAAHGYLLHQFLSPLSNQRRDQYGGCFENRIRLLLQVTAAVRKAWPQELPLFVRLSATDWVEDGWNPDETVELARHLKDLGVDLIDVSSGGTAANAEIPVGPGYQTEFAERVKKEAGIASGTVGMITEPVQAEHILRTGQADLILLARELLRDPYWPLHAADELRNEQMPWPPQYLRAAHRSTPPRKSLEMQ |
| 4M5P Chain:A ((15-224)) | ----FQSIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGWEGAAP----GIWTDKHAKAWKVITDKVHANGSFVSTQLCFLGRVAD---PAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILEL----------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92509 for 1603 contacts (-57.7/contact) +
2D Compatibility (PS) -20987 + (NN) -2192 + (LL) 11408
1D Compatibility (HY) -9600 + (ID) 3650
Total energy: -117530.0 ( -73.32 by residue)
QMean score : 0.309
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