Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFASLGLLD-PLLKALEGLGHGTPTPIQAQAIPPAL--KGRDLLAAAQTGTGKTAGFALPLLQRLTLEGPQVAANSVRALVLVPTRELAEQVHASVR---DYGQHLPLRTAVA-YGGVSINPQMMKLRK-GVDILVATPGRLLDLYRQNAVKFAQL-QALVLDEADRMLDLGFARELDELFAALPRKR-------QTLLFSATFSDAIRTLARELL--RDPLSIEVSPRNT--AAKSVRQWLVPVDKKRKAELFC---HLLQANRWR----QALVFAKTRKSVEELVGLLQ---RQGIAADSIHGDKPQPARLRALQRFKAGEVDLLVATDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAIETLIGQTLQRREEPDFEPEHRVPQTAPGGVVLKKPKKPKKPKAAESVGKPGKIHLGSWFDSSAPTVKAVRKAPGFGAGAAGKPKKRPSGK |
| 3SQW Chain:A ((26-426)) | ------GVLDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHL-INTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVV-ISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELEDAKNIVIAKQEK--YEPSEEI-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208744 for 3051 contacts (-68.4/contact) +
2D Compatibility (PS) -40359 + (NN) -22490 + (LL) 1808
1D Compatibility (HY) -31200 + (ID) 6400
Total energy: -307385.0 ( -100.75 by residue)
QMean score : 0.534
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