Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALTNEDIINAVSEMSVMQVVELIKAMEEK-FGVTAAA-ATVAAAGPAAAAAEEQTEFTIVLAEAGDKKVNVIKVVRELTGLGLKEAKAVVDGAPGVVKEGASKEEAEAAKKALEEAGAKVELK------
2HJQ Chain:A ((1-111))
-----------------MFTAKLIKGKTYNVMGITFRAGVSQTVPKKLYEYLNENPYFILTQELNNQKDDPINYTESELKGMNKAEHESIISNLGR--NPSDFKNADERIAYILKQIDNKGELEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2HJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1493 for 613 contacts (2.4/contact) +
2D Compatibility (PS) -11324 + (NN) -4027 + (LL) 2024
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -13634.0 ( -22.24 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2HJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HJQ-query.scw
PDB file :
Tito_Scwrl_2HJQ.pdb
: